Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs7585764 chr2:97260071 C/T 0 258 1.07 30.93 32.13 KM Plot
SARC rs7587299 chr2:216654118 A/G 0 258 1.07 36.1 31.57 KM Plot
SARC rs75882785 chr21:45518084 G/A 9.74E-5 250 30.3 41.33 6 KM Plot
SARC rs75894153 chr12:26109872 T/C 2.37E-5 249 32.88 31.57 16.45 KM Plot
SARC rs7607197 chr2:70231391 C/T 4.35E-8 255 32.78 32.6 10.72 KM Plot
SARC rs76214486 chr3:159807880 C/G 2.03E-12 258 32.13 30.73 3.1 KM Plot
SARC rs7634127 chr3:38969306 C/T 2.44E-7 258 13.47 37.23 30.73 KM Plot
SARC rs76344458 chr8:129396016 C/T 1.74E-13 258 33.9 23.17 3.97 KM Plot
SARC rs7640293 chr3:53130905 C/T 0 254 32.6 26.53 2.13 KM Plot
SARC rs76437407 chr8:129360494 C/T 2.22E-13 256 33.9 19.62 3.97 KM Plot
SARC rs76439341 chr4:106716000 C/T 6.7E-5 256 32.3 35.37 21.6 KM Plot
SARC rs7650848 chr3:71933693 T/G 3.56E-6 250 16.17 38.07 30.75 KM Plot
SARC rs76680219 chr1:45032443 G/A 4.04E-11 252 32.5 27.7 3.1 KM Plot
SARC rs7697558 chr4:42110719 T/C 1.89E-5 256 33.2 31.42 9.87 KM Plot
SARC rs7713158 chr5:108179300 G/A 7.05E-5 254 33.18 27.7 4.6 KM Plot